STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB34252.1Acetyl xylan esterase (AXE1); KEGG: bsu:BG11919 5.9e-28 cah; cephalosporin C deacetylase K01060. (523 aa)    
Predicted Functional Partners:
EFB34251.1
Hypothetical protein.
       0.631
EFB35470.1
Putative DNA-binding protein.
  
     0.500
EFB34988.1
Putative DNA-binding protein.
  
     0.500
EFB34132.1
Zinc-dependent metalloproteinase lipoprotein, BF0631 family.
  
     0.488
EFB34253.1
Hypothetical protein; KEGG: gbe:GbCGDNIH1_0235 1.8e-17 dATP pyrophosphohydrolase K01529; Psort location: Cytoplasmic, score: 8.96.
       0.464
EFB36317.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.440
EFB34250.1
Carboxylesterase; KEGG: msm:MSMEG_0470 6.9e-69 para-nitrobenzyl esterase K01066; Belongs to the type-B carboxylesterase/lipase family.
       0.439
EFB36634.1
VirE N-terminal domain protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.432
EFB35381.1
VirE N-terminal domain protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.432
EFB36333.1
VirE N-terminal domain protein.
  
     0.416
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.