STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB34224.1Hypothetical protein; KEGG: cps:CPS_1104 0.0014 dipeptidyl peptidase IV K01278. (402 aa)    
Predicted Functional Partners:
EFB34223.1
Hypothetical protein.
       0.773
EFB34202.1
Competence/damage-inducible domain protein CinA; Psort location: Cytoplasmic, score: 8.96; Belongs to the CinA family.
  
 
  0.592
EFB34222.1
TIGR00730 family protein; KEGG: bcl:ABC1937 1.8e-22 lysine decarboxylase K01582; Belongs to the LOG family.
       0.562
EFB36932.1
Pectinesterase; KEGG: chu:CHU_0744 9.4e-07 CHU large protein K01238; Psort location: Extracellular, score: 9.96.
  
  
  0.528
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
  0.526
EFB35378.1
PEGA domain protein; KEGG: aba:Acid345_0037 0.00014 serine/threonine protein kinase K08884.
  
     0.469
EFB34870.1
WD40-like protein; KEGG: mxa:MXAN_6601 8.9e-07 peptidase, S9C (acylaminoacyl-peptidase) subfamily K01423.
  
    0.449
EFB36937.1
Glycosyl hydrolase, family 88; KEGG: tma:TM0437 3.0e-75 exo-poly-alpha-D-galacturonosidase, putative K01238; Psort location: Extracellular, score: 9.71; Belongs to the glycosyl hydrolase 28 family.
  
     0.407
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
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