STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
galEKEGG: bth:BT0623 9.6e-127 putative UDP-glucose 4-epimerase K01784; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (345 aa)    
Predicted Functional Partners:
galK
Galactokinase; KEGG: bfs:BF1661 4.1e-151 galK; putative galactokinase K00849; Psort location: Cytoplasmic, score: 8.96; Belongs to the GHMP kinase family. GalK subfamily.
 
 0.982
EFB34529.1
NAD dependent epimerase/dehydratase family protein; KEGG: vfi:VF0192 1.0e-67 UDP-2-acetamido-2,6-dideoxy-beta-L-talose 4-dehydrogenase K00100.
  
 0.804
EFB36358.1
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
 
 
 0.761
EFB35737.1
Nucleotide sugar dehydrogenase; KEGG: spr:spr0318 4.5e-168 cps2K; UDPglucose 6-dehydrogenase K00012.
  
 
 0.737
EFB34533.1
Nucleotide sugar dehydrogenase; KEGG: bth:BT0599 1.3e-186 UDP-glucose 6-dehydrogenase K00012; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
  
 
 0.737
rfbB
KEGG: bth:BT0466 1.2e-169 dTDP-glucose 4,6-dehydratase K01710.
 
 
0.672
EFB36361.1
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
 
 
 0.650
murB
UDP-N-acetylmuramate dehydrogenase; Cell wall formation.
     
 0.599
ribB
3,4-dihydroxy-2-butanone-4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
   
 
 0.570
EFB34161.1
Hypothetical protein.
       0.568
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
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