STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB34178.1MORN repeat protein; KEGG: tbr:Tb10.406.0580 3.3e-35 protein kinase K00924. (384 aa)    
Predicted Functional Partners:
EFB34179.1
YhcH/YjgK/YiaL family protein; Psort location: Cytoplasmic, score: 8.96.
       0.610
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
    
  0.569
EFB35600.1
KEGG: ehi:224.t00010 6.0e-09 leucine rich repeat protein K01768.
  
 
  0.565
EFB34180.1
Alpha amylase, catalytic domain protein; KEGG: bfr:BF2243 0. 1,4-alpha-glucan branching enzyme K00700; Psort location: Cytoplasmic, score: 8.96.
       0.544
EFB33789.1
Hypothetical protein.
  
     0.537
EFB34181.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.521
EFB36483.1
DnaJ domain protein; KEGG: cme:CMJ043C 4.4e-07 phycocyanobilin lyase alpha subunit K02288; Psort location: Cytoplasmic, score: 9.26.
  
 
 
 0.495
EFB34177.1
LytTr DNA-binding domain protein; KEGG: rru:Rru_A0376 8.5e-16 transcriptional regulator, LytR/AlgR family K07705; Psort location: Cytoplasmic, score: 8.96.
       0.495
EFB34358.1
Putative pantothenate kinase; Similar to putative CG5725-PE; KEGG: saa:SAUSA300_2084 2.4e-12 coaA; pantothenate kinase K00867.
    
 
 0.472
EFB33853.1
KEGG: hin:HI1272 1.1e-05 hypothetical ABC transporter ATP-binding protein HI1272 K02013.
  
     0.443
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
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