Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EFB34180.1Alpha amylase, catalytic domain protein; KEGG: bfr:BF2243 0. 1,4-alpha-glucan branching enzyme K00700; Psort location: Cytoplasmic, score: 8.96. (699 aa)    
Predicted Functional Partners:
EFB36304.1
Starch synthase catalytic domain protein; KEGG: chu:CHU_3836 4.7e-54 glgA; glycogen synthase-related protein K00703; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.994
glgP
KEGG: bfr:BF2726 0. alpha-glucan phosphorylase K00688.
 
 0.990
pulA
Pullulanase, type I; KEGG: bth:BT4689 6.5e-160 pullulanase precursor K01200; Psort location: Cytoplasmic, score: 9.26; Belongs to the glycosyl hydrolase 13 family.
 
 
0.986
EFB36921.1
Glycosyltransferase, group 1 family protein; KEGG: sat:SYN_00881 1.9e-82 4-alpha-glucanotransferase K00705.
 
 0.981
EFB34690.1
KEGG: bfr:BF3828 2.9e-253 4-alpha-glucanotransferase K00705; Psort location: Cytoplasmic, score: 9.26.
 
 
 0.966
EFB35123.1
Alpha amylase, catalytic domain protein; KEGG: sde:Sde_0563 4.4e-32 alpha-amylase K01176.
 
 
 0.941
EFB36922.1
Glycosyl hydrolase, family 57; KEGG: pgi:PG1683 6.8e-110 hypothetical protein K07405.
 
  
 0.923
atpD
ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
    
 0.908
EFB34779.1
Hypothetical protein; KEGG: xcv:XCV2800 2.3e-139 putative alpha-glucosidase K01187.
     
  0.900
EFB34689.1
Hemagglutinin esterase; KEGG: xcv:XCV2800 6.3e-130 putative alpha-glucosidase K01187.
     
  0.900
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
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