STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB34140.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (193 aa)    
Predicted Functional Partners:
tpiA
Triose-phosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
       0.824
EFB36850.1
Hypothetical protein; KEGG: gox:GOX1475 0.00049 putative N-acetylglucosamine kinase K00884; Psort location: Cytoplasmic, score: 8.96.
  
     0.754
EFB34945.1
Putative ACR, COG1399; Psort location: Cytoplasmic, score: 8.96.
  
     0.742
EFB34928.1
Hypothetical protein.
  
     0.696
EFB35135.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.693
EFB34141.1
HDIG domain protein; KEGG: bfs:BF3442 7.0e-179 putative polyA polymerase K00970; Psort location: Cytoplasmic, score: 8.96; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
 
     0.675
hemD
KEGG: chu:CHU_0169 6.3e-59 hemD; uroporphyrinogen-III synthase K01719.
  
     0.652
EFB36153.1
Putative o-succinylbenzoate synthase; KEGG: chu:CHU_2415 1.1e-63 clcB; chloromuconate cycloisomerase K01860; Psort location: Cytoplasmic, score: 8.96.
  
     0.648
EFB35739.1
Type I restriction enzyme HsdR protein N-terminal domain protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.644
EFB36169.1
Hypothetical protein.
  
     0.643
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.