STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB34046.1Hypothetical protein. (234 aa)    
Predicted Functional Partners:
EFB34045.1
Glycosyl hydrolase, family 43; CBM9 module, Glycoside Hydrolase Family 8 protein and Carbohydrate Esterase Family 4 protein; KEGG: chu:CHU_1240 8.9e-72 CHU large protein; candidate bifunctional xylanase/esterase; CBM9 module, glycoside hydrolase family 8 protein and carbohydrate esterase family 4 protein K01238.
      0.777
EFB34047.1
Hypothetical protein; KEGG: shm:Shewmr7_1980 6.2e-29 arabinan endo-1,5-alpha-L-arabinosidase; Belongs to the glycosyl hydrolase 43 family.
       0.719
EFB34048.1
Hypothetical protein.
       0.719
EFB34049.1
Glycosyl hydrolase, family 31; KEGG: aba:Acid345_0898 6.8e-133 alpha-glucosidase K01187; Belongs to the glycosyl hydrolase 31 family.
       0.533
EFB34044.1
Hypothetical protein.
       0.485
EFB34042.1
Hypothetical protein; KEGG: chu:CHU_2041 8.2e-71 CHU large protein; candidate polyfunctional acetylxylan esterase/b-xylosidase/A-L-arabinofuranosidase, CBM9 module, glycoside hydrolase family 43 protein and carbohydrate esterase family 6 protein K01238.
    
 0.452
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
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