STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB34049.1Glycosyl hydrolase, family 31; KEGG: aba:Acid345_0898 6.8e-133 alpha-glucosidase K01187; Belongs to the glycosyl hydrolase 31 family. (845 aa)    
Predicted Functional Partners:
EFB33804.1
Glycosyl hydrolase family 35; KEGG: xfa:XF0840 2.3e-109 beta-galactosidase K01190.
 
 
 0.667
EFB34051.1
Glycosyl hydrolase family 3 C-terminal domain protein; KEGG: xoo:XOO4423 5.5e-163 glucan 1,4-beta-glucosidase K01188; Psort location: Periplasmic, score: 9.44.
 
  
 0.664
EFB34047.1
Hypothetical protein; KEGG: shm:Shewmr7_1980 6.2e-29 arabinan endo-1,5-alpha-L-arabinosidase; Belongs to the glycosyl hydrolase 43 family.
 
     0.642
EFB35772.1
Aconitate hydratase; KEGG: bfs:BF3543 1.2e-286 acn; putative aconitase K01681; Psort location: Cytoplasmic, score: 9.26.
    
   0.596
EFB34045.1
Glycosyl hydrolase, family 43; CBM9 module, Glycoside Hydrolase Family 8 protein and Carbohydrate Esterase Family 4 protein; KEGG: chu:CHU_1240 8.9e-72 CHU large protein; candidate bifunctional xylanase/esterase; CBM9 module, glycoside hydrolase family 8 protein and carbohydrate esterase family 4 protein K01238.
 
     0.592
EFB34048.1
Hypothetical protein.
       0.578
EFB36483.1
DnaJ domain protein; KEGG: cme:CMJ043C 4.4e-07 phycocyanobilin lyase alpha subunit K02288; Psort location: Cytoplasmic, score: 9.26.
   
   0.572
dnaJ
Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...]
   
   0.572
EFB35735.1
DnaJ domain protein.
   
   0.572
fba
KEGG: bth:BT1691 1.5e-135 fructose-bisphosphate aldolase, class II K01624.
   
   0.536
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
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