STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nadBL-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. (529 aa)    
Predicted Functional Partners:
nadA
Quinolinate synthetase complex, A subunit; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate.
 
 0.999
nadC
Nicotinate-nucleotide diphosphorylase (carboxylating); KEGG: bfs:BF1400 3.3e-117 nadC; putative nicotinate-nucleotide pyrophosphorylase [carboxylating] (quinolinate phosphoribosyltransferase [decarboxylating]) K00767; Psort location: Cytoplasmic, score: 9.97; Belongs to the NadC/ModD family.
  
 0.995
nifJ
Pyruvate synthase; KEGG: bfs:BF3168 0. nifJ; putative pyruvate-flavodoxin oxidoreductase K03737; Psort location: Cytoplasmic, score: 8.96.
    
 0.920
EFB34455.1
Lactate/malate dehydrogenase, NAD binding domain protein; KEGG: pgi:PG1949 2.3e-109 mdh; malate dehydrogenase K00026; Psort location: Cytoplasmic, score: 9.26; Belongs to the LDH/MDH superfamily.
 
  
 0.902
panD
Aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.
    
 0.891
EFB36454.1
L-asparaginase, type I; KEGG: bfr:BF2658 3.7e-109 L-asparaginase I K01424.
   
 
 0.887
purA
Adenylosuccinate synthase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
     
 0.887
EFB34481.1
KEGG: bth:BT2403 1.8e-299 homoserine dehydrogenase.
    
 0.886
EFB36199.1
Aminotransferase, class I/II; KEGG: bfs:BF1601 7.7e-189 putative aspartate aminotransferase K00812.
     
 0.874
EFB34067.1
Aminotransferase, class I/II; KEGG: bfr:BF0595 9.4e-168 aspartate aminotransferase K00812.
     
 0.874
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
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