STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB33694.1Nitrogen regulatory protein P-II; KEGG: cya:CYA_1505 0.00081 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991; Belongs to the P(II) protein family. (118 aa)    
Predicted Functional Partners:
amt-2
Ammonium transporter; KEGG: ter:Tery_3993 8.0e-38 adenylate/guanylate cyclase K01769; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.948
amt
Ammonium transporter; KEGG: ter:Tery_3993 5.0e-71 adenylate/guanylate cyclase K01769; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.941
argB
Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.
    
 
 0.770
EFB34847.1
Class II glutamine amidotransferase; KEGG: bth:BT0553 0. glutamate synthase, large subunit K00265; Psort location: Cytoplasmic, score: 8.96.
     
 0.642
dapF
Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.
     
 0.558
EFB33693.1
Hypothetical protein.
       0.543
EFB36473.1
Tetratricopeptide repeat protein.
    
 
 0.534
EFB36140.1
Hypothetical protein; KEGG: baf:BAPKO_0675 7.5e-12 recD; exodeoxyribonuclease V, alpha chain K03581; Psort location: Cytoplasmic, score: 8.96.
    
 
 0.508
EFB33984.1
Hypothetical protein; KEGG: baf:BAPKO_0675 4.5e-11 recD; exodeoxyribonuclease V, alpha chain K03581; Psort location: Cytoplasmic, score: 8.96.
    
 
 0.508
EFB36573.1
Tetratricopeptide repeat protein; KEGG: ddi:DDB0204693 1.4e-08 hypothetical protein K00921.
    
   0.506
Your Current Organism:
Prevotella copri
NCBI taxonomy Id: 537011
Other names: P. copri DSM 18205, Prevotella copri CB7, Prevotella copri DSM 18205, Prevotella copri JCM 13464, Prevotella copri str. DSM 18205, Prevotella copri strain DSM 18205
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