STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEG31273.1Hypothetical protein. (156 aa)    
Predicted Functional Partners:
EEG30883.1
Hypothetical protein.
  
     0.774
EEG32084.1
Putative ribonuclease M5; KEGG: fnu:FN0039 6.0e-15 DNA primase (bacterial type) and small primase-like proteins K05985; Psort location: Cytoplasmic, score: 8.87.
  
     0.757
EEG29034.1
S1 RNA binding domain protein; KEGG: ctc:CTC01314 1.8e-08 conserved protein K03527.
  
     0.756
EEG29755.1
Hypothetical protein; KEGG: cac:CAC1253 6.7e-07 sporulation protein IvfB related protein, predicted metallopeptidase K06402; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.755
EEG31165.1
DNA-binding helix-turn-helix protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.745
EEG28540.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.75.
  
     0.745
EEG30015.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.742
EEG31278.1
Hypothetical protein; KEGG: tma:TM0853 0.00040 sensor histidine kinase K02484; Psort location: Cytoplasmic, score: 8.87.
 
     0.724
EEG29775.1
Hypothetical protein.
  
     0.715
EEG32100.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.709
Your Current Organism:
Clostridium methylpentosum
NCBI taxonomy Id: 537013
Other names: Clostridium methylpentosum ATCC 43829, Clostridium methylpentosum DSM 5476, Clostridium methylpentosum R2, [. methylpentosum DSM 5476, [Clostridium] methylpentosum DSM 5476
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.