STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
motB-2Flagellar motor protein MotB. (276 aa)    
Predicted Functional Partners:
motA
Flagellar motor component MotA.
 
 0.999
cheA
Chemotaxis protein CheA [Campylobacter jejuni subsp. jejuni 260.94].
  
  
 0.967
cheV
Chemotaxis protein (cheV) [Campylobacter lari RM2100].
  
  
 0.928
flgK
Flagellar hook-associated protein [Wolinella succinogenes DSM 1740].
 
  
 0.905
fliS
Flagellar protein FliS [Wolinella succinogenes DSM 1740].
 
  
 0.898
cheV-2
Chemotaxis signal transduction protein CheV [Helicobacter hepaticus ATCC 51449].
  
  
 0.897
HCAN_0836
Conserved hypothetical protein.
   
 0.888
fliP
Flagellar biosynthesis protein; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.
 
  
 0.887
fliG
Flagellar motor protein [Wolinella succinogenes DSM 1740].
 
 
 0.872
fliY
Flagellar motor switch protein [Wolinella succinogenes DSM 1740].
 
  
 0.867
Your Current Organism:
Helicobacter canadensis
NCBI taxonomy Id: 537970
Other names: H. canadensis MIT 98-5491, Helicobacter canadensis ATCC 700968, Helicobacter canadensis H438, Helicobacter canadensis MIT 98-5491, Helicobacter canadensis NCTC 13241, Helicobacter canadensis NLEP-16143, Helicobacter canadensis str. MIT 98-5491, Helicobacter canadensis strain MIT 98-5491
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.