STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001696535_00176Unannotated protein. (326 aa)    
Predicted Functional Partners:
GCA_001696535_00177
Unannotated protein; Condenses choline with CDP-diglyceride to produce phosphatidylcholine and CMP; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
     0.580
GCA_001696535_00175
Unannotated protein.
       0.526
GCA_001696535_01001
Unannotated protein.
  
     0.523
GCA_001696535_01494
Unannotated protein.
  
     0.493
GCA_001696535_03099
Unannotated protein.
  
     0.469
GCA_001696535_02454
Unannotated protein; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane.
  
     0.446
GCA_001696535_01278
Unannotated protein.
  
     0.434
GCA_001696535_02455
Unannotated protein.
  
     0.433
GCA_001696535_00659
Unannotated protein.
  
     0.428
GCA_001696535_01336
Unannotated protein.
  
     0.423
Your Current Organism:
Stappia indica
NCBI taxonomy Id: 538381
Other names: CCTCC AB 208228, LMG 24625, LMG:24625, MCCC 1A01226, S. indica, Stappia indica Lai et al. 2010, Stappia sp. B106, strain B106, strain PR56-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.