Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_001696535_00432 | GCA_001696535_02383 | GCA_001696535_00432 | GCA_001696535_02383 | Unannotated protein. | Unannotated protein; Belongs to the ABC transporter superfamily. | 0.741 |
GCA_001696535_00432 | GCA_001696535_02411 | GCA_001696535_00432 | GCA_001696535_02411 | Unannotated protein. | Unannotated protein. | 0.755 |
GCA_001696535_00432 | GCA_001696535_03027 | GCA_001696535_00432 | GCA_001696535_03027 | Unannotated protein. | Unannotated protein. | 0.686 |
GCA_001696535_00432 | GCA_001696535_03350 | GCA_001696535_00432 | GCA_001696535_03350 | Unannotated protein. | Unannotated protein. | 0.613 |
GCA_001696535_00432 | LpxI | GCA_001696535_00432 | GCA_001696535_00320 | Unannotated protein. | Unannotated protein. | 0.628 |
GCA_001696535_00432 | dnaK | GCA_001696535_00432 | GCA_001696535_03715 | Unannotated protein. | Unannotated protein; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.768 |
GCA_001696535_00432 | grpE | GCA_001696535_00432 | GCA_001696535_03844 | Unannotated protein. | Unannotated protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-depe [...] | 0.618 |
GCA_001696535_00432 | lpxK | GCA_001696535_00432 | GCA_001696535_02578 | Unannotated protein. | Unannotated protein; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA). | 0.818 |
GCA_001696535_00432 | phnC | GCA_001696535_00432 | GCA_001696535_02274 | Unannotated protein. | Unannotated protein; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family. | 0.875 |
GCA_001696535_00432 | phnC-2 | GCA_001696535_00432 | GCA_001696535_03705 | Unannotated protein. | Unannotated protein; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family. | 0.849 |
GCA_001696535_02383 | GCA_001696535_00432 | GCA_001696535_02383 | GCA_001696535_00432 | Unannotated protein; Belongs to the ABC transporter superfamily. | Unannotated protein. | 0.741 |
GCA_001696535_02411 | GCA_001696535_00432 | GCA_001696535_02411 | GCA_001696535_00432 | Unannotated protein. | Unannotated protein. | 0.755 |
GCA_001696535_02411 | GCA_001696535_03027 | GCA_001696535_02411 | GCA_001696535_03027 | Unannotated protein. | Unannotated protein. | 0.999 |
GCA_001696535_02411 | GCA_001696535_03350 | GCA_001696535_02411 | GCA_001696535_03350 | Unannotated protein. | Unannotated protein. | 0.999 |
GCA_001696535_02411 | dnaK | GCA_001696535_02411 | GCA_001696535_03715 | Unannotated protein. | Unannotated protein; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.589 |
GCA_001696535_03027 | GCA_001696535_00432 | GCA_001696535_03027 | GCA_001696535_00432 | Unannotated protein. | Unannotated protein. | 0.686 |
GCA_001696535_03027 | GCA_001696535_02411 | GCA_001696535_03027 | GCA_001696535_02411 | Unannotated protein. | Unannotated protein. | 0.999 |
GCA_001696535_03027 | GCA_001696535_03350 | GCA_001696535_03027 | GCA_001696535_03350 | Unannotated protein. | Unannotated protein. | 0.999 |
GCA_001696535_03027 | dnaK | GCA_001696535_03027 | GCA_001696535_03715 | Unannotated protein. | Unannotated protein; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.482 |
GCA_001696535_03350 | GCA_001696535_00432 | GCA_001696535_03350 | GCA_001696535_00432 | Unannotated protein. | Unannotated protein. | 0.613 |
page 1 of 2