Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_001696535_00405 | GCA_001696535_00886 | GCA_001696535_00405 | GCA_001696535_00886 | Unannotated protein. | Unannotated protein. | 0.575 |
GCA_001696535_00405 | GCA_001696535_04072 | GCA_001696535_00405 | GCA_001696535_04072 | Unannotated protein. | Unannotated protein. | 0.611 |
GCA_001696535_00405 | GCA_001696535_04352 | GCA_001696535_00405 | GCA_001696535_04352 | Unannotated protein. | Unannotated protein. | 0.538 |
GCA_001696535_00886 | GCA_001696535_00405 | GCA_001696535_00886 | GCA_001696535_00405 | Unannotated protein. | Unannotated protein. | 0.575 |
GCA_001696535_00886 | GCA_001696535_00887 | GCA_001696535_00886 | GCA_001696535_00887 | Unannotated protein. | Unannotated protein. | 0.919 |
GCA_001696535_00886 | GCA_001696535_00888 | GCA_001696535_00886 | GCA_001696535_00888 | Unannotated protein. | Unannotated protein; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | 0.872 |
GCA_001696535_00886 | GCA_001696535_04072 | GCA_001696535_00886 | GCA_001696535_04072 | Unannotated protein. | Unannotated protein. | 0.569 |
GCA_001696535_00886 | GCA_001696535_04352 | GCA_001696535_00886 | GCA_001696535_04352 | Unannotated protein. | Unannotated protein. | 0.634 |
GCA_001696535_00886 | frr | GCA_001696535_00886 | GCA_001696535_00329 | Unannotated protein. | Unannotated protein; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family. | 0.576 |
GCA_001696535_00886 | rplD | GCA_001696535_00886 | GCA_001696535_00925 | Unannotated protein. | Unannotated protein; Forms part of the polypeptide exit tunnel. | 0.600 |
GCA_001696535_00886 | rplV | GCA_001696535_00886 | GCA_001696535_00921 | Unannotated protein. | Unannotated protein; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. | 0.623 |
GCA_001696535_00886 | tsf | GCA_001696535_00886 | GCA_001696535_00331 | Unannotated protein. | Unannotated protein; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family. | 0.577 |
GCA_001696535_00886 | ubiA | GCA_001696535_00886 | GCA_001696535_02585 | Unannotated protein. | Unannotated protein; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate. | 0.629 |
GCA_001696535_00887 | GCA_001696535_00886 | GCA_001696535_00887 | GCA_001696535_00886 | Unannotated protein. | Unannotated protein. | 0.919 |
GCA_001696535_00887 | GCA_001696535_00888 | GCA_001696535_00887 | GCA_001696535_00888 | Unannotated protein. | Unannotated protein; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | 0.895 |
GCA_001696535_00888 | GCA_001696535_00886 | GCA_001696535_00888 | GCA_001696535_00886 | Unannotated protein; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | Unannotated protein. | 0.872 |
GCA_001696535_00888 | GCA_001696535_00887 | GCA_001696535_00888 | GCA_001696535_00887 | Unannotated protein; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | Unannotated protein. | 0.895 |
GCA_001696535_00888 | GCA_001696535_04352 | GCA_001696535_00888 | GCA_001696535_04352 | Unannotated protein; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | Unannotated protein. | 0.474 |
GCA_001696535_00888 | rplD | GCA_001696535_00888 | GCA_001696535_00925 | Unannotated protein; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | Unannotated protein; Forms part of the polypeptide exit tunnel. | 0.520 |
GCA_001696535_04072 | GCA_001696535_00405 | GCA_001696535_04072 | GCA_001696535_00405 | Unannotated protein. | Unannotated protein. | 0.611 |
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