STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001696535_01167Unannotated protein. (236 aa)    
Predicted Functional Partners:
GCA_001696535_01170
Unannotated protein.
  
 0.996
GCA_001696535_01168
Unannotated protein.
 
     0.828
GCA_001696535_01169
Unannotated protein.
       0.793
GCA_001696535_00121
Unannotated protein.
 
  
 0.712
GCA_001696535_01171
Unannotated protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
  
 
 0.507
GCA_001696535_03840
Unannotated protein.
  
  
 0.486
GCA_001696535_01172
Unannotated protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
  
 
 0.439
GCA_001696535_01173
Unannotated protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
  
 
 0.409
GCA_001696535_03378
Unannotated protein.
  
  
 0.407
Your Current Organism:
Stappia indica
NCBI taxonomy Id: 538381
Other names: CCTCC AB 208228, LMG 24625, LMG:24625, MCCC 1A01226, S. indica, Stappia indica Lai et al. 2010, Stappia sp. B106, strain B106, strain PR56-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.