STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001696535_01737Unannotated protein; Belongs to the UPF0335 family. (87 aa)    
Predicted Functional Partners:
GCA_001696535_01275
Unannotated protein.
  
   
 0.794
GCA_001696535_01769
Unannotated protein.
  
   
 0.762
AddB
Unannotated protein.
  
     0.761
GCA_001696535_00574
Unannotated protein.
  
     0.737
recO
Unannotated protein; Involved in DNA repair and RecF pathway recombination.
  
     0.731
GCA_001696535_04398
Unannotated protein.
  
     0.711
AddA
Unannotated protein; Belongs to the helicase family. UvrD subfamily.
  
     0.709
GCA_001696535_04134
Unannotated protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
  
     0.689
GCA_001696535_03900
Unannotated protein.
  
     0.667
ftsQ
Unannotated protein; Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily.
  
     0.661
Your Current Organism:
Stappia indica
NCBI taxonomy Id: 538381
Other names: CCTCC AB 208228, LMG 24625, LMG:24625, MCCC 1A01226, S. indica, Stappia indica Lai et al. 2010, Stappia sp. B106, strain B106, strain PR56-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.