STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001696535_02200Unannotated protein. (249 aa)    
Predicted Functional Partners:
FabF
Unannotated protein; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
 
 0.928
FabF-2
Unannotated protein; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
 
 0.928
FabB
Unannotated protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
 0.928
fabA
Unannotated protein; Necessary for the introduction of cis unsaturation into fatty acids. Catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to E- (2)-decenoyl-ACP and then its isomerization to Z-(3)-decenoyl-ACP. Can catalyze the dehydratase reaction for beta-hydroxyacyl-ACPs with saturated chain lengths up to 16:0, being most active on intermediate chain length.
  
 0.925
fabZ
Unannotated protein; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs.
  
 0.923
GCA_001696535_03474
Unannotated protein.
  
 
 0.913
GCA_001696535_03475
Unannotated protein.
  
 
 0.911
GCA_001696535_00635
Unannotated protein.
 
    
0.895
GCA_001696535_02201
Unannotated protein; Belongs to the aldehyde dehydrogenase family.
   0.822
GCA_001696535_02411
Unannotated protein.
  
 
 0.792
Your Current Organism:
Stappia indica
NCBI taxonomy Id: 538381
Other names: CCTCC AB 208228, LMG 24625, LMG:24625, MCCC 1A01226, S. indica, Stappia indica Lai et al. 2010, Stappia sp. B106, strain B106, strain PR56-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.