STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001696535_02492Unannotated protein. (903 aa)    
Predicted Functional Partners:
GCA_001696535_02411
Unannotated protein.
  
  
 0.732
GCA_001696535_01079
Unannotated protein.
 
 
 
 0.718
GCA_001696535_01693
Unannotated protein.
 
 
 
 0.714
GCA_001696535_03027
Unannotated protein.
  
  
 0.638
GCA_001696535_03350
Unannotated protein.
  
  
 0.596
GCA_001696535_02406
Unannotated protein.
  
  
 0.595
GCA_001696535_02692
Unannotated protein.
 
     0.560
GCA_001696535_01049
Unannotated protein.
  
  
 0.517
GCA_001696535_01596
Unannotated protein.
   
   0.513
GCA_001696535_01908
Unannotated protein.
   
   0.513
Your Current Organism:
Stappia indica
NCBI taxonomy Id: 538381
Other names: CCTCC AB 208228, LMG 24625, LMG:24625, MCCC 1A01226, S. indica, Stappia indica Lai et al. 2010, Stappia sp. B106, strain B106, strain PR56-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.