STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001696535_03100Unannotated protein. (285 aa)    
Predicted Functional Partners:
leuA
Unannotated protein; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily.
 
 0.969
GCA_001696535_00463
Unannotated protein; Belongs to the alpha-IPM synthase/homocitrate synthase family.
 
 0.967
GCA_001696535_01651
Unannotated protein; Belongs to the IlvD/Edd family.
  
 0.959
ilvD
Unannotated protein; Belongs to the IlvD/Edd family.
  
 0.959
ilvD-2
Unannotated protein; Belongs to the IlvD/Edd family.
  
 0.959
GCA_001696535_03880
Unannotated protein.
  
 0.935
GCA_001696535_01682
Unannotated protein; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 
 0.924
GCA_001696535_03496
Unannotated protein.
  
 0.922
ilvE
Unannotated protein; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
  
  
 
0.921
GCA_001696535_03497
Unannotated protein.
  
 
 0.911
Your Current Organism:
Stappia indica
NCBI taxonomy Id: 538381
Other names: CCTCC AB 208228, LMG 24625, LMG:24625, MCCC 1A01226, S. indica, Stappia indica Lai et al. 2010, Stappia sp. B106, strain B106, strain PR56-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.