STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001696535_04134Unannotated protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). (214 aa)    
Predicted Functional Partners:
GCA_001696535_04133
Unannotated protein.
  
  
 0.826
AddB
Unannotated protein.
 
     0.809
GCA_001696535_04132
Unannotated protein.
     
 0.782
lptD
Unannotated protein; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.
  
   
 0.777
AddA
Unannotated protein; Belongs to the helicase family. UvrD subfamily.
 
     0.760
GCA_001696535_01769
Unannotated protein.
  
     0.720
GCA_001696535_01275
Unannotated protein.
  
     0.714
GCA_001696535_01737
Unannotated protein; Belongs to the UPF0335 family.
  
     0.689
GCA_001696535_04128
Unannotated protein.
 
     0.689
BamE
Unannotated protein.
 
 
 
 0.673
Your Current Organism:
Stappia indica
NCBI taxonomy Id: 538381
Other names: CCTCC AB 208228, LMG 24625, LMG:24625, MCCC 1A01226, S. indica, Stappia indica Lai et al. 2010, Stappia sp. B106, strain B106, strain PR56-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.