Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CcrA | GCA_001696535_00171 | GCA_001696535_04189 | GCA_001696535_00171 | Unannotated protein. | Unannotated protein; Belongs to the HpcH/HpaI aldolase family. | 0.792 |
CcrA | GCA_001696535_00801 | GCA_001696535_04189 | GCA_001696535_00801 | Unannotated protein. | Unannotated protein. | 0.503 |
CcrA | GCA_001696535_04102 | GCA_001696535_04189 | GCA_001696535_04102 | Unannotated protein. | Unannotated protein. | 0.798 |
CcrA | GCA_001696535_04190 | GCA_001696535_04189 | GCA_001696535_04190 | Unannotated protein. | Unannotated protein. | 0.929 |
CcrA | GCA_001696535_04345 | GCA_001696535_04189 | GCA_001696535_04345 | Unannotated protein. | Unannotated protein. | 0.872 |
CcrA | Mce | GCA_001696535_04189 | GCA_001696535_00355 | Unannotated protein. | Unannotated protein. | 0.935 |
GCA_001696535_00060 | GCA_001696535_00171 | GCA_001696535_00060 | GCA_001696535_00171 | Unannotated protein; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | Unannotated protein; Belongs to the HpcH/HpaI aldolase family. | 0.478 |
GCA_001696535_00060 | GCA_001696535_00680 | GCA_001696535_00060 | GCA_001696535_00680 | Unannotated protein; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | Unannotated protein. | 0.629 |
GCA_001696535_00060 | GCA_001696535_00801 | GCA_001696535_00060 | GCA_001696535_00801 | Unannotated protein; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | Unannotated protein. | 0.523 |
GCA_001696535_00060 | GCA_001696535_04190 | GCA_001696535_00060 | GCA_001696535_04190 | Unannotated protein; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | Unannotated protein. | 0.643 |
GCA_001696535_00060 | Mce | GCA_001696535_00060 | GCA_001696535_00355 | Unannotated protein; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | Unannotated protein. | 0.407 |
GCA_001696535_00060 | ScpA | GCA_001696535_00060 | GCA_001696535_00682 | Unannotated protein; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | Unannotated protein. | 0.643 |
GCA_001696535_00171 | CcrA | GCA_001696535_00171 | GCA_001696535_04189 | Unannotated protein; Belongs to the HpcH/HpaI aldolase family. | Unannotated protein. | 0.792 |
GCA_001696535_00171 | GCA_001696535_00060 | GCA_001696535_00171 | GCA_001696535_00060 | Unannotated protein; Belongs to the HpcH/HpaI aldolase family. | Unannotated protein; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | 0.478 |
GCA_001696535_00171 | GCA_001696535_00680 | GCA_001696535_00171 | GCA_001696535_00680 | Unannotated protein; Belongs to the HpcH/HpaI aldolase family. | Unannotated protein. | 0.910 |
GCA_001696535_00171 | GCA_001696535_04102 | GCA_001696535_00171 | GCA_001696535_04102 | Unannotated protein; Belongs to the HpcH/HpaI aldolase family. | Unannotated protein. | 0.564 |
GCA_001696535_00171 | GCA_001696535_04190 | GCA_001696535_00171 | GCA_001696535_04190 | Unannotated protein; Belongs to the HpcH/HpaI aldolase family. | Unannotated protein. | 0.737 |
GCA_001696535_00171 | GCA_001696535_04345 | GCA_001696535_00171 | GCA_001696535_04345 | Unannotated protein; Belongs to the HpcH/HpaI aldolase family. | Unannotated protein. | 0.817 |
GCA_001696535_00680 | GCA_001696535_00060 | GCA_001696535_00680 | GCA_001696535_00060 | Unannotated protein. | Unannotated protein; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | 0.629 |
GCA_001696535_00680 | GCA_001696535_00171 | GCA_001696535_00680 | GCA_001696535_00171 | Unannotated protein. | Unannotated protein; Belongs to the HpcH/HpaI aldolase family. | 0.910 |
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