Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
FtsK_1 | Lrp_2 | A7P85_05975 | A7P85_02385 | Cell division protein FtsK; Derived by automated computational analysis using gene prediction method: Protein Homology. | AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.449 |
FtsK_1 | RarA | A7P85_05975 | A7P85_10765 | Cell division protein FtsK; Derived by automated computational analysis using gene prediction method: Protein Homology. | Recombination factor protein RarA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.560 |
Lrp_2 | FtsK_1 | A7P85_02385 | A7P85_05975 | AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cell division protein FtsK; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.449 |
Lrp_2 | PutA | A7P85_02385 | A7P85_02810 | AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.616 |
Lrp_2 | RarA | A7P85_02385 | A7P85_10765 | AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Recombination factor protein RarA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.653 |
Lrp_2 | msrA | A7P85_02385 | A7P85_08985 | AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Trifunctional thioredoxin/methionine sulfoxide reductase A/B protein; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.450 |
Lrp_2 | pnp | A7P85_02385 | A7P85_02380 | AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.446 |
PutA | Lrp_2 | A7P85_02810 | A7P85_02385 | Bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.616 |
RarA | FtsK_1 | A7P85_10765 | A7P85_05975 | Recombination factor protein RarA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cell division protein FtsK; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.560 |
RarA | Lrp_2 | A7P85_10765 | A7P85_02385 | Recombination factor protein RarA; Derived by automated computational analysis using gene prediction method: Protein Homology. | AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.653 |
msrA | Lrp_2 | A7P85_08985 | A7P85_02385 | Trifunctional thioredoxin/methionine sulfoxide reductase A/B protein; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.450 |
msrA | pnp | A7P85_08985 | A7P85_02380 | Trifunctional thioredoxin/methionine sulfoxide reductase A/B protein; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.588 |
pnp | Lrp_2 | A7P85_02380 | A7P85_02385 | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.446 |
pnp | msrA | A7P85_02380 | A7P85_08985 | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | Trifunctional thioredoxin/methionine sulfoxide reductase A/B protein; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.588 |