Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| BsdC | OAM17290.1 | A7P85_07495 | A7P85_02785 | 3,4-dihydroxybenzoate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UbiD family. | MmcQ protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.423 |
| KdsC | LptB | A7P85_02800 | A7P85_02780 | Phenylphosphate carboxylase subunit delta; Derived by automated computational analysis using gene prediction method: Protein Homology. | LPS export ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.697 |
| KdsC | OAM17288.1 | A7P85_02800 | A7P85_02775 | Phenylphosphate carboxylase subunit delta; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.571 |
| KdsC | OAM17290.1 | A7P85_02800 | A7P85_02785 | Phenylphosphate carboxylase subunit delta; Derived by automated computational analysis using gene prediction method: Protein Homology. | MmcQ protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.768 |
| KdsC | OAM17291.1 | A7P85_02800 | A7P85_02795 | Phenylphosphate carboxylase subunit delta; Derived by automated computational analysis using gene prediction method: Protein Homology. | LPS export ABC transporter periplasmic protein LptC; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.907 |
| KdsC | lptA | A7P85_02800 | A7P85_02790 | Phenylphosphate carboxylase subunit delta; Derived by automated computational analysis using gene prediction method: Protein Homology. | Lipopolysaccharide transport periplasmic protein LptA; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. | 0.835 |
| LptB | KdsC | A7P85_02780 | A7P85_02800 | LPS export ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Phenylphosphate carboxylase subunit delta; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.697 |
| LptB | OAM17288.1 | A7P85_02780 | A7P85_02775 | LPS export ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.811 |
| LptB | OAM17290.1 | A7P85_02780 | A7P85_02785 | LPS export ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | MmcQ protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.465 |
| LptB | OAM17291.1 | A7P85_02780 | A7P85_02795 | LPS export ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | LPS export ABC transporter periplasmic protein LptC; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| LptB | lptA | A7P85_02780 | A7P85_02790 | LPS export ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Lipopolysaccharide transport periplasmic protein LptA; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. | 0.925 |
| OAM17288.1 | KdsC | A7P85_02775 | A7P85_02800 | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Phenylphosphate carboxylase subunit delta; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.571 |
| OAM17288.1 | LptB | A7P85_02775 | A7P85_02780 | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | LPS export ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.811 |
| OAM17288.1 | OAM17290.1 | A7P85_02775 | A7P85_02785 | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | MmcQ protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.442 |
| OAM17288.1 | OAM17291.1 | A7P85_02775 | A7P85_02795 | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | LPS export ABC transporter periplasmic protein LptC; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.593 |
| OAM17288.1 | lptA | A7P85_02775 | A7P85_02790 | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Lipopolysaccharide transport periplasmic protein LptA; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. | 0.614 |
| OAM17290.1 | BsdC | A7P85_02785 | A7P85_07495 | MmcQ protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 3,4-dihydroxybenzoate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UbiD family. | 0.423 |
| OAM17290.1 | KdsC | A7P85_02785 | A7P85_02800 | MmcQ protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Phenylphosphate carboxylase subunit delta; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.768 |
| OAM17290.1 | LptB | A7P85_02785 | A7P85_02780 | MmcQ protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | LPS export ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.465 |
| OAM17290.1 | OAM17288.1 | A7P85_02785 | A7P85_02775 | MmcQ protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.442 |
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