STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OAM16335.1enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. (167 aa)    
Predicted Functional Partners:
OAM16332.1
Baseplate protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.784
OAM16409.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.778
OAM16331.1
Phage baseplate protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.775
OAM16330.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.770
OAM16333.1
Phage tail protein I; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.768
OAM16334.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.762
OAM16336.1
Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.557
OAM16337.1
Phage major tail tube protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.543
OAM16329.1
Phage virion morphogenesis protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.487
OAM16408.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.443
Your Current Organism:
Eikenella corrodens
NCBI taxonomy Id: 539
Other names: ATCC 23834, Bacteroides corrodens, CCUG 2138, CIP 70.75, DSM 8340, E. corrodens, JCM 12952, LMG 15557, LMG:15557, NCTC 10596, Ristella corrodens
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.