STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CcoP2Cytochrome c oxidase, cbb3-type subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex. (344 aa)    
Predicted Functional Partners:
OAM15360.1
Cytochrome c oxidase, cbb3-type subunit I; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the heme-copper respiratory oxidase family.
 
 0.999
OAM15361.1
Cytochrome c oxidase, cbb3-type subunit II; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
PetA
Ubiquinol-cytochrome c reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
 
 0.999
PetB
Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.999
OAM16585.1
Cytochrome c oxidase accessory protein CcoG; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.995
OAM16047.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.919
NorB
Nitric oxide reductase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.916
PetC
Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.831
NarG
Nitrate reductase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
   
 
 0.790
OAM16586.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.726
Your Current Organism:
Eikenella corrodens
NCBI taxonomy Id: 539
Other names: ATCC 23834, Bacteroides corrodens, CCUG 2138, CIP 70.75, DSM 8340, E. corrodens, JCM 12952, LMG 15557, LMG:15557, NCTC 10596, Ristella corrodens
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