STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001646675_01112Unannotated protein. (352 aa)    
Predicted Functional Partners:
GCA_001646675_01937
Unannotated protein.
  
  
 0.954
GCA_001646675_02742
Unannotated protein.
  
  
 0.954
GCA_001646675_00189
Unannotated protein.
  
  
 0.936
GCA_001646675_02372
Unannotated protein.
  
 0.866
GCA_001646675_02943
Unannotated protein.
 
 
 0.851
GCA_001646675_00151
Unannotated protein.
   
 0.831
GCA_001646675_01114
Unannotated protein.
       0.828
GCA_001646675_01362
Unannotated protein.
   
 0.802
GCA_001646675_01113
Unannotated protein.
       0.801
GCA_001646675_01110
Unannotated protein.
       0.773
Your Current Organism:
Rhodococcus corynebacterioides
NCBI taxonomy Id: 53972
Other names: ATCC 14898, CCUG 37877, CIP 104510, Corynebacterium rubrum, DSM 20151, IFO 14404, JCM 3376, JCM 3391, NBRC 14404, NCTC 10391, NRRL B-24037, Nocardia corynebacterioides, R. corynebacterioides
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.