STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001646675_01114Unannotated protein. (762 aa)    
Predicted Functional Partners:
GCA_001646675_01113
Unannotated protein.
 
 
 0.993
GCA_001646675_01642
Unannotated protein.
     
 0.914
GCA_001646675_01643
Unannotated protein.
     
 0.914
GCA_001646675_00623
Unannotated protein.
    
 0.911
GCA_001646675_01282
Unannotated protein.
  
 
 0.895
GCA_001646675_01112
Unannotated protein.
       0.828
GCA_001646675_01110
Unannotated protein.
       0.773
GCA_001646675_01111
Unannotated protein.
       0.773
GCA_001646675_02723
Unannotated protein.
    
 0.746
GCA_001646675_00726
Unannotated protein.
    
 0.743
Your Current Organism:
Rhodococcus corynebacterioides
NCBI taxonomy Id: 53972
Other names: ATCC 14898, CCUG 37877, CIP 104510, Corynebacterium rubrum, DSM 20151, IFO 14404, JCM 3376, JCM 3391, NBRC 14404, NCTC 10391, NRRL B-24037, Nocardia corynebacterioides, R. corynebacterioides
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.