STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001646675_02032Unannotated protein. (299 aa)    
Predicted Functional Partners:
GCA_001646675_01233
Unannotated protein.
 
  
 0.879
GCA_001646675_01110
Unannotated protein.
 
  
 0.717
GCA_001646675_02321
Unannotated protein.
   
    0.602
GCA_001646675_00137
Unannotated protein.
 
  
 0.541
GCA_001646675_03548
Unannotated protein.
  
 
 0.504
GCA_001646675_02991
Unannotated protein.
  
 
   0.495
GCA_001646675_01090
Unannotated protein.
  
     0.479
GCA_001646675_00138
Unannotated protein.
  
  
 0.472
GCA_001646675_01294
Unannotated protein.
   
    0.453
GCA_001646675_01955
Unannotated protein.
   
   0.428
Your Current Organism:
Rhodococcus corynebacterioides
NCBI taxonomy Id: 53972
Other names: ATCC 14898, CCUG 37877, CIP 104510, Corynebacterium rubrum, DSM 20151, IFO 14404, JCM 3376, JCM 3391, NBRC 14404, NCTC 10391, NRRL B-24037, Nocardia corynebacterioides, R. corynebacterioides
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.