STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001646675_02040Unannotated protein. (244 aa)    
Predicted Functional Partners:
GCA_001646675_02921
Unannotated protein.
  
  
  0.873
GCA_001646675_02041
Unannotated protein.
  
 
  0.813
GCA_001646675_00560
Unannotated protein.
 
  
  0.658
GCA_001646675_02042
Unannotated protein.
    
  0.641
GCA_001646675_03065
Unannotated protein.
    
  0.591
GCA_001646675_02104
Unannotated protein.
  
     0.582
GCA_001646675_01644
Unannotated protein.
    
  0.532
GCA_001646675_02376
Unannotated protein.
    
  0.532
GCA_001646675_03068
Unannotated protein.
    
 0.511
GCA_001646675_00419
Unannotated protein.
   
 
  0.489
Your Current Organism:
Rhodococcus corynebacterioides
NCBI taxonomy Id: 53972
Other names: ATCC 14898, CCUG 37877, CIP 104510, Corynebacterium rubrum, DSM 20151, IFO 14404, JCM 3376, JCM 3391, NBRC 14404, NCTC 10391, NRRL B-24037, Nocardia corynebacterioides, R. corynebacterioides
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.