Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFD49630.1 | SFE39164.1 | SAMN02745121_00251 | SAMN02745121_04077 | Leucine rich repeat-containing protein. | Ca2+-binding protein, EF-hand superfamily. | 0.898 |
SFD49630.1 | SFE49101.1 | SAMN02745121_00251 | SAMN02745121_04466 | Leucine rich repeat-containing protein. | Uridine kinase. | 0.642 |
SFD49630.1 | SFE49518.1 | SAMN02745121_00251 | SAMN02745121_04489 | Leucine rich repeat-containing protein. | Ankyrin repeat. | 0.658 |
SFD49630.1 | SFE67418.1 | SAMN02745121_00251 | SAMN02745121_05131 | Leucine rich repeat-containing protein. | Hypothetical protein. | 0.731 |
SFD49630.1 | SFE86053.1 | SAMN02745121_00251 | SAMN02745121_05830 | Leucine rich repeat-containing protein. | Cell wall assembly regulator SMI1. | 0.654 |
SFD49630.1 | SFF08706.1 | SAMN02745121_00251 | SAMN02745121_06844 | Leucine rich repeat-containing protein. | Hypothetical protein. | 0.716 |
SFD49630.1 | SFF22224.1 | SAMN02745121_00251 | SAMN02745121_07579 | Leucine rich repeat-containing protein. | Hypothetical protein. | 0.775 |
SFD49630.1 | SFF33813.1 | SAMN02745121_00251 | SAMN02745121_08233 | Leucine rich repeat-containing protein. | Methylthioribulose-1-phosphate dehydratase. | 0.692 |
SFD49630.1 | SFF33975.1 | SAMN02745121_00251 | SAMN02745121_08248 | Leucine rich repeat-containing protein. | Ankyrin repeat-containing protein. | 0.711 |
SFD49630.1 | atpE | SAMN02745121_00251 | SAMN02745121_00998 | Leucine rich repeat-containing protein. | ATP synthase F0 subcomplex C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.717 |
SFE39164.1 | SFD49630.1 | SAMN02745121_04077 | SAMN02745121_00251 | Ca2+-binding protein, EF-hand superfamily. | Leucine rich repeat-containing protein. | 0.898 |
SFE39164.1 | SFE49518.1 | SAMN02745121_04077 | SAMN02745121_04489 | Ca2+-binding protein, EF-hand superfamily. | Ankyrin repeat. | 0.678 |
SFE39164.1 | SFE86053.1 | SAMN02745121_04077 | SAMN02745121_05830 | Ca2+-binding protein, EF-hand superfamily. | Cell wall assembly regulator SMI1. | 0.723 |
SFE39164.1 | SFF33975.1 | SAMN02745121_04077 | SAMN02745121_08248 | Ca2+-binding protein, EF-hand superfamily. | Ankyrin repeat-containing protein. | 0.769 |
SFE49101.1 | SFD49630.1 | SAMN02745121_04466 | SAMN02745121_00251 | Uridine kinase. | Leucine rich repeat-containing protein. | 0.642 |
SFE49101.1 | SFF33975.1 | SAMN02745121_04466 | SAMN02745121_08248 | Uridine kinase. | Ankyrin repeat-containing protein. | 0.401 |
SFE49518.1 | SFD49630.1 | SAMN02745121_04489 | SAMN02745121_00251 | Ankyrin repeat. | Leucine rich repeat-containing protein. | 0.658 |
SFE49518.1 | SFE39164.1 | SAMN02745121_04489 | SAMN02745121_04077 | Ankyrin repeat. | Ca2+-binding protein, EF-hand superfamily. | 0.678 |
SFE49518.1 | SFE86053.1 | SAMN02745121_04489 | SAMN02745121_05830 | Ankyrin repeat. | Cell wall assembly regulator SMI1. | 0.735 |
SFE67418.1 | SFD49630.1 | SAMN02745121_05131 | SAMN02745121_00251 | Hypothetical protein. | Leucine rich repeat-containing protein. | 0.731 |
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