Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFD52678.1 | SFD52695.1 | SAMN02745121_00438 | SAMN02745121_00439 | Mevalonate kinase. | Diphosphomevalonate decarboxylase. | 0.997 |
SFD52678.1 | SFD52709.1 | SAMN02745121_00438 | SAMN02745121_00440 | Mevalonate kinase. | 3-hydroxy-3-methylglutaryl-coenzyme A reductase; Belongs to the HMG-CoA reductase family. | 0.999 |
SFD52678.1 | SFF25535.1 | SAMN02745121_00438 | SAMN02745121_07754 | Mevalonate kinase. | hydroxymethylglutaryl-CoA synthase. | 0.908 |
SFD52678.1 | fni | SAMN02745121_00438 | SAMN02745121_00437 | Mevalonate kinase. | Isopentenyl-diphosphate delta-isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). Belongs to the IPP isomerase type 2 family. | 0.983 |
SFD52695.1 | SFD52678.1 | SAMN02745121_00439 | SAMN02745121_00438 | Diphosphomevalonate decarboxylase. | Mevalonate kinase. | 0.997 |
SFD52695.1 | SFD52709.1 | SAMN02745121_00439 | SAMN02745121_00440 | Diphosphomevalonate decarboxylase. | 3-hydroxy-3-methylglutaryl-coenzyme A reductase; Belongs to the HMG-CoA reductase family. | 0.976 |
SFD52695.1 | SFE62486.1 | SAMN02745121_00439 | SAMN02745121_04929 | Diphosphomevalonate decarboxylase. | Geranylgeranyl diphosphate synthase, type II; Belongs to the FPP/GGPP synthase family. | 0.834 |
SFD52695.1 | SFF25535.1 | SAMN02745121_00439 | SAMN02745121_07754 | Diphosphomevalonate decarboxylase. | hydroxymethylglutaryl-CoA synthase. | 0.917 |
SFD52695.1 | fni | SAMN02745121_00439 | SAMN02745121_00437 | Diphosphomevalonate decarboxylase. | Isopentenyl-diphosphate delta-isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). Belongs to the IPP isomerase type 2 family. | 0.991 |
SFD52709.1 | SFD52678.1 | SAMN02745121_00440 | SAMN02745121_00438 | 3-hydroxy-3-methylglutaryl-coenzyme A reductase; Belongs to the HMG-CoA reductase family. | Mevalonate kinase. | 0.999 |
SFD52709.1 | SFD52695.1 | SAMN02745121_00440 | SAMN02745121_00439 | 3-hydroxy-3-methylglutaryl-coenzyme A reductase; Belongs to the HMG-CoA reductase family. | Diphosphomevalonate decarboxylase. | 0.976 |
SFD52709.1 | SFF25535.1 | SAMN02745121_00440 | SAMN02745121_07754 | 3-hydroxy-3-methylglutaryl-coenzyme A reductase; Belongs to the HMG-CoA reductase family. | hydroxymethylglutaryl-CoA synthase. | 0.983 |
SFD52709.1 | fni | SAMN02745121_00440 | SAMN02745121_00437 | 3-hydroxy-3-methylglutaryl-coenzyme A reductase; Belongs to the HMG-CoA reductase family. | Isopentenyl-diphosphate delta-isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). Belongs to the IPP isomerase type 2 family. | 0.970 |
SFD52709.1 | guaB | SAMN02745121_00440 | SAMN02745121_00655 | 3-hydroxy-3-methylglutaryl-coenzyme A reductase; Belongs to the HMG-CoA reductase family. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.475 |
SFE07641.1 | SFE43148.1 | SAMN02745121_02915 | SAMN02745121_04257 | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | Allosteric NADP-dependent malic enzyme. | 0.927 |
SFE07641.1 | SFF12789.1 | SAMN02745121_02915 | SAMN02745121_07073 | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | 4-aminobutyrate aminotransferase. | 0.896 |
SFE07641.1 | SFF25535.1 | SAMN02745121_02915 | SAMN02745121_07754 | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | hydroxymethylglutaryl-CoA synthase. | 0.816 |
SFE07641.1 | fni | SAMN02745121_02915 | SAMN02745121_00437 | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | Isopentenyl-diphosphate delta-isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). Belongs to the IPP isomerase type 2 family. | 0.875 |
SFE43148.1 | SFE07641.1 | SAMN02745121_04257 | SAMN02745121_02915 | Allosteric NADP-dependent malic enzyme. | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | 0.927 |
SFE43148.1 | SFF12789.1 | SAMN02745121_04257 | SAMN02745121_07073 | Allosteric NADP-dependent malic enzyme. | 4-aminobutyrate aminotransferase. | 0.949 |
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