Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFD53331.1 | SFD77083.1 | SAMN02745121_00472 | SAMN02745121_01494 | Serine protease, S1-C subfamily, contains C-terminal PDZ domain. | Hypothetical protein. | 0.467 |
SFD53331.1 | SFD91272.1 | SAMN02745121_00472 | SAMN02745121_02151 | Serine protease, S1-C subfamily, contains C-terminal PDZ domain. | Trypsin-like peptidase domain-containing protein. | 0.642 |
SFD53331.1 | SFE01457.1 | SAMN02745121_00472 | SAMN02745121_02684 | Serine protease, S1-C subfamily, contains C-terminal PDZ domain. | Hypothetical protein. | 0.837 |
SFD53331.1 | SFE12485.1 | SAMN02745121_00472 | SAMN02745121_03064 | Serine protease, S1-C subfamily, contains C-terminal PDZ domain. | Tetratricopeptide repeat-containing protein. | 0.569 |
SFD53331.1 | SFE65370.1 | SAMN02745121_00472 | SAMN02745121_05015 | Serine protease, S1-C subfamily, contains C-terminal PDZ domain. | 3-hydroxyacyl-CoA dehydrogenase / 3a,7a,12a-trihydroxy-5b-cholest-24-enoyl-CoA hydratase. | 0.787 |
SFD53331.1 | SFE66205.1 | SAMN02745121_00472 | SAMN02745121_05070 | Serine protease, S1-C subfamily, contains C-terminal PDZ domain. | Serine/threonine protein kinase. | 0.485 |
SFD53331.1 | SFE67992.1 | SAMN02745121_00472 | SAMN02745121_05156 | Serine protease, S1-C subfamily, contains C-terminal PDZ domain. | Serine/threonine protein kinase. | 0.569 |
SFD53331.1 | SFF31518.1 | SAMN02745121_00472 | SAMN02745121_08104 | Serine protease, S1-C subfamily, contains C-terminal PDZ domain. | HAMP domain-containing protein. | 0.467 |
SFD53331.1 | glpK | SAMN02745121_00472 | SAMN02745121_07249 | Serine protease, S1-C subfamily, contains C-terminal PDZ domain. | Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family. | 0.501 |
SFD53331.1 | rplI | SAMN02745121_00472 | SAMN02745121_06930 | Serine protease, S1-C subfamily, contains C-terminal PDZ domain. | Large subunit ribosomal protein L9; Binds to the 23S rRNA. | 0.555 |
SFD77083.1 | SFD53331.1 | SAMN02745121_01494 | SAMN02745121_00472 | Hypothetical protein. | Serine protease, S1-C subfamily, contains C-terminal PDZ domain. | 0.467 |
SFD77083.1 | SFD91272.1 | SAMN02745121_01494 | SAMN02745121_02151 | Hypothetical protein. | Trypsin-like peptidase domain-containing protein. | 0.467 |
SFD77083.1 | SFE01457.1 | SAMN02745121_01494 | SAMN02745121_02684 | Hypothetical protein. | Hypothetical protein. | 0.409 |
SFD77083.1 | SFE12485.1 | SAMN02745121_01494 | SAMN02745121_03064 | Hypothetical protein. | Tetratricopeptide repeat-containing protein. | 0.932 |
SFD77083.1 | SFE65370.1 | SAMN02745121_01494 | SAMN02745121_05015 | Hypothetical protein. | 3-hydroxyacyl-CoA dehydrogenase / 3a,7a,12a-trihydroxy-5b-cholest-24-enoyl-CoA hydratase. | 0.424 |
SFD77083.1 | SFE66205.1 | SAMN02745121_01494 | SAMN02745121_05070 | Hypothetical protein. | Serine/threonine protein kinase. | 0.851 |
SFD77083.1 | SFE67992.1 | SAMN02745121_01494 | SAMN02745121_05156 | Hypothetical protein. | Serine/threonine protein kinase. | 0.932 |
SFD77083.1 | SFF31518.1 | SAMN02745121_01494 | SAMN02745121_08104 | Hypothetical protein. | HAMP domain-containing protein. | 0.999 |
SFD91272.1 | SFD53331.1 | SAMN02745121_02151 | SAMN02745121_00472 | Trypsin-like peptidase domain-containing protein. | Serine protease, S1-C subfamily, contains C-terminal PDZ domain. | 0.642 |
SFD91272.1 | SFD77083.1 | SAMN02745121_02151 | SAMN02745121_01494 | Trypsin-like peptidase domain-containing protein. | Hypothetical protein. | 0.467 |
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