STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD54758.1Acetolactate synthase-1/2/3 large subunit; Belongs to the TPP enzyme family. (584 aa)    
Predicted Functional Partners:
SFE29151.1
3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit.
 
 
 0.961
SFE19869.1
3-isopropylmalate dehydrogenase.
 0.907
SFF12789.1
4-aminobutyrate aminotransferase.
 
 0.894
SFE43148.1
Allosteric NADP-dependent malic enzyme.
  
 
 0.886
SFE07575.1
2-isopropylmalate synthase.
 
 
 0.883
SFD65786.1
Threonine dehydratase.
  
 0.855
SFE07641.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
    
 0.854
SFE59871.1
Acetolactate synthase-1/2/3 large subunit; Belongs to the TPP enzyme family.
  
  
 
0.850
SFE41279.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 0.824
mdh
Malate dehydrogenase (NAD); Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.
  
 0.823
Your Current Organism:
Nannocystis exedens
NCBI taxonomy Id: 54
Other names: ATCC 25963, DSM 71, N. exedens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.