STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD56050.1Hypothetical protein. (2095 aa)    
Predicted Functional Partners:
SFE63047.1
Penicillin-binding protein 1C.
 
   
 0.671
SFD73791.1
Hypothetical protein.
    
  0.585
SFD56077.1
Hypothetical protein.
       0.555
SFD56032.1
Hypothetical protein.
       0.545
SFD56083.1
Phosphoinositide phospholipase C, Ca2+-dependent.
       0.516
SFE15832.1
Vault protein inter-alpha-trypsin domain-containing protein.
 
  
 0.516
SFE26079.1
Vault protein inter-alpha-trypsin domain-containing protein.
 
  
 0.485
SFE13309.1
Hypothetical protein.
  
     0.442
SFD79668.1
Trypsin.
    
  0.426
SFD93999.1
Trypsin.
    
  0.426
Your Current Organism:
Nannocystis exedens
NCBI taxonomy Id: 54
Other names: ATCC 25963, DSM 71, N. exedens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.