Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFD51017.1 | SFD54381.1 | SAMN02745121_00343 | SAMN02745121_00527 | Hypothetical protein. | Type IV pilus biogenesis. | 0.489 |
SFD51017.1 | SFD55701.1 | SAMN02745121_00343 | SAMN02745121_00597 | Hypothetical protein. | Forkhead associated (FHA) domain, binds pSer, pThr, pTyr. | 0.680 |
SFD51017.1 | SFD55722.1 | SAMN02745121_00343 | SAMN02745121_00598 | Hypothetical protein. | Forkhead associated (FHA) domain, binds pSer, pThr, pTyr. | 0.703 |
SFD51017.1 | SFD63966.1 | SAMN02745121_00343 | SAMN02745121_00842 | Hypothetical protein. | Myxococcus cysteine-rich repeat-containing protein. | 0.657 |
SFD51017.1 | SFE03838.1 | SAMN02745121_00343 | SAMN02745121_02796 | Hypothetical protein. | Hypothetical protein. | 0.751 |
SFD51017.1 | SFE07323.1 | SAMN02745121_00343 | SAMN02745121_02896 | Hypothetical protein. | Lipopolysaccharide biosynthesis regulator YciM, contains six TPR domains and a predicted metal-binding C-terminal domain. | 0.773 |
SFD51017.1 | SFE12485.1 | SAMN02745121_00343 | SAMN02745121_03064 | Hypothetical protein. | Tetratricopeptide repeat-containing protein. | 0.748 |
SFD51017.1 | SFE53473.1 | SAMN02745121_00343 | SAMN02745121_04584 | Hypothetical protein. | Myxococcus cysteine-rich repeat-containing protein. | 0.650 |
SFD51017.1 | SFF12242.1 | SAMN02745121_00343 | SAMN02745121_07036 | Hypothetical protein. | Tetratricopeptide repeat-containing protein. | 0.740 |
SFD54381.1 | SFD51017.1 | SAMN02745121_00527 | SAMN02745121_00343 | Type IV pilus biogenesis. | Hypothetical protein. | 0.489 |
SFD54381.1 | SFD55701.1 | SAMN02745121_00527 | SAMN02745121_00597 | Type IV pilus biogenesis. | Forkhead associated (FHA) domain, binds pSer, pThr, pTyr. | 0.506 |
SFD54381.1 | SFD55722.1 | SAMN02745121_00527 | SAMN02745121_00598 | Type IV pilus biogenesis. | Forkhead associated (FHA) domain, binds pSer, pThr, pTyr. | 0.534 |
SFD54381.1 | SFD63966.1 | SAMN02745121_00527 | SAMN02745121_00842 | Type IV pilus biogenesis. | Myxococcus cysteine-rich repeat-containing protein. | 0.658 |
SFD54381.1 | SFE03838.1 | SAMN02745121_00527 | SAMN02745121_02796 | Type IV pilus biogenesis. | Hypothetical protein. | 0.574 |
SFD54381.1 | SFE07323.1 | SAMN02745121_00527 | SAMN02745121_02896 | Type IV pilus biogenesis. | Lipopolysaccharide biosynthesis regulator YciM, contains six TPR domains and a predicted metal-binding C-terminal domain. | 0.652 |
SFD54381.1 | SFE12485.1 | SAMN02745121_00527 | SAMN02745121_03064 | Type IV pilus biogenesis. | Tetratricopeptide repeat-containing protein. | 0.693 |
SFD54381.1 | SFE46442.1 | SAMN02745121_00527 | SAMN02745121_04328 | Type IV pilus biogenesis. | Hypothetical protein. | 0.427 |
SFD54381.1 | SFE53473.1 | SAMN02745121_00527 | SAMN02745121_04584 | Type IV pilus biogenesis. | Myxococcus cysteine-rich repeat-containing protein. | 0.412 |
SFD54381.1 | SFF12242.1 | SAMN02745121_00527 | SAMN02745121_07036 | Type IV pilus biogenesis. | Tetratricopeptide repeat-containing protein. | 0.721 |
SFD55701.1 | SFD51017.1 | SAMN02745121_00597 | SAMN02745121_00343 | Forkhead associated (FHA) domain, binds pSer, pThr, pTyr. | Hypothetical protein. | 0.680 |
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