Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFD66359.1 | SFD66376.1 | SAMN02745121_01011 | SAMN02745121_01012 | 6-pyruvoyltetrahydropterin/6- carboxytetrahydropterin synthase. | Acetoin utilization deacetylase AcuC. | 0.560 |
SFD66359.1 | SFD66387.1 | SAMN02745121_01011 | SAMN02745121_01013 | 6-pyruvoyltetrahydropterin/6- carboxytetrahydropterin synthase. | Membrane protein. | 0.495 |
SFD66376.1 | SFD66359.1 | SAMN02745121_01012 | SAMN02745121_01011 | Acetoin utilization deacetylase AcuC. | 6-pyruvoyltetrahydropterin/6- carboxytetrahydropterin synthase. | 0.560 |
SFD66376.1 | SFD66387.1 | SAMN02745121_01012 | SAMN02745121_01013 | Acetoin utilization deacetylase AcuC. | Membrane protein. | 0.717 |
SFD66387.1 | SFD66359.1 | SAMN02745121_01013 | SAMN02745121_01011 | Membrane protein. | 6-pyruvoyltetrahydropterin/6- carboxytetrahydropterin synthase. | 0.495 |
SFD66387.1 | SFD66376.1 | SAMN02745121_01013 | SAMN02745121_01012 | Membrane protein. | Acetoin utilization deacetylase AcuC. | 0.717 |
SFD66387.1 | SFD66457.1 | SAMN02745121_01013 | SAMN02745121_01016 | Membrane protein. | Uncharacterized conserved protein YjbJ, UPF0337 family; Belongs to the UPF0337 (CsbD) family. | 0.402 |
SFD66387.1 | SFD82668.1 | SAMN02745121_01013 | SAMN02745121_01669 | Membrane protein. | Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide. | 0.426 |
SFD66387.1 | SFE33030.1 | SAMN02745121_01013 | SAMN02745121_03862 | Membrane protein. | YihY family inner membrane protein. | 0.576 |
SFD66387.1 | rph | SAMN02745121_01013 | SAMN02745121_03586 | Membrane protein. | RNAse PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.556 |
SFD66457.1 | SFD66387.1 | SAMN02745121_01016 | SAMN02745121_01013 | Uncharacterized conserved protein YjbJ, UPF0337 family; Belongs to the UPF0337 (CsbD) family. | Membrane protein. | 0.402 |
SFD66457.1 | SFD82668.1 | SAMN02745121_01016 | SAMN02745121_01669 | Uncharacterized conserved protein YjbJ, UPF0337 family; Belongs to the UPF0337 (CsbD) family. | Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide. | 0.484 |
SFD82668.1 | SFD66387.1 | SAMN02745121_01669 | SAMN02745121_01013 | Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide. | Membrane protein. | 0.426 |
SFD82668.1 | SFD66457.1 | SAMN02745121_01669 | SAMN02745121_01016 | Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide. | Uncharacterized conserved protein YjbJ, UPF0337 family; Belongs to the UPF0337 (CsbD) family. | 0.484 |
SFE33030.1 | SFD66387.1 | SAMN02745121_03862 | SAMN02745121_01013 | YihY family inner membrane protein. | Membrane protein. | 0.576 |
SFE33030.1 | rph | SAMN02745121_03862 | SAMN02745121_03586 | YihY family inner membrane protein. | RNAse PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.556 |
rph | SFD66387.1 | SAMN02745121_03586 | SAMN02745121_01013 | RNAse PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | Membrane protein. | 0.556 |
rph | SFE33030.1 | SAMN02745121_03586 | SAMN02745121_03862 | RNAse PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | YihY family inner membrane protein. | 0.556 |