STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD67182.1NitT/TauT family transport system permease protein. (338 aa)    
Predicted Functional Partners:
SFD67194.1
NitT/TauT family transport system ATP-binding protein.
 
 
 0.993
SFE82544.1
NitT/TauT family transport system substrate-binding protein.
 
 0.972
SFF10551.1
NitT/TauT family transport system ATP-binding protein.
 
 
 0.957
SFF10497.1
NitT/TauT family transport system substrate-binding protein.
 
 
 0.915
SFF10541.1
NitT/TauT family transport system permease protein.
 
  
  0.867
SFD74577.1
Prokaryotic molybdopterin-containing oxidoreductase family, iron-sulfur binding subunit.
  
 
 0.801
SFD83572.1
Prokaryotic molybdopterin-containing oxidoreductase family, iron-sulfur binding subunit.
  
 
 0.801
SFE36488.1
Taurine catabolism dioxygenase TauD, TfdA family.
  
 
 0.533
SFF03839.1
Gamma-butyrobetaine dioxygenase.
  
 
 0.533
SFF36120.1
Amino acid adenylation domain-containing protein.
  
 
 0.527
Your Current Organism:
Nannocystis exedens
NCBI taxonomy Id: 54
Other names: ATCC 25963, DSM 71, N. exedens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.