STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD67424.1Glyoxylase, beta-lactamase superfamily II. (427 aa)    
Predicted Functional Partners:
SFE23113.1
Helix-turn-helix.
  
 
  0.801
SFD67041.1
Ribosome association toxin PasT (RatA) of the RatAB toxin-antitoxin module.
  
  
  0.797
SFE00800.1
PDZ domain (Also known as DHR or GLGF).
  
     0.773
SFE00822.1
PDZ domain-containing protein.
  
     0.772
SFE41559.1
Carboxypeptidase regulatory-like domain-containing protein.
  
     0.772
SFE71935.1
Carboxypeptidase regulatory-like domain-containing protein.
  
     0.772
SFD57239.1
Long-chain fatty acid transport protein.
  
     0.767
SFE47687.1
Hypothetical protein.
  
     0.745
SFD68651.1
PDZ domain-containing protein.
  
     0.744
SFE89542.1
Cysteine-rich secretory protein family protein.
  
     0.727
Your Current Organism:
Nannocystis exedens
NCBI taxonomy Id: 54
Other names: ATCC 25963, DSM 71, N. exedens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.