STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD67758.1NADP-dependent 3-hydroxy acid dehydrogenase YdfG; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (264 aa)    
Predicted Functional Partners:
SFF36086.1
Amino acid adenylation domain-containing protein.
  
 0.876
SFF36120.1
Amino acid adenylation domain-containing protein.
   
 0.876
SFF17364.1
Amino acid adenylation domain-containing protein.
  
 0.855
SFF19357.1
Amino acid adenylation domain-containing protein.
  
 0.855
SFF19374.1
Amino acid adenylation domain-containing protein.
  
 0.855
SFF50914.1
Phosphopantetheine attachment site.
  
 
 0.804
SFE21503.1
Enoyl-(Acyl carrier protein) reductase.
  
 
  0.788
SFE42967.1
Pteridine reductase.
  
 
  0.780
SFD94092.1
Short-chain dehydrogenase.
  
     0.740
SFE90473.1
3-oxoacyl-[acyl-carrier protein] reductase.
  
 
  0.738
Your Current Organism:
Nannocystis exedens
NCBI taxonomy Id: 54
Other names: ATCC 25963, DSM 71, N. exedens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.