Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFD58169.1 | SFD80015.1 | SAMN02745121_00720 | SAMN02745121_01666 | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | Uridine phosphorylase. | 0.934 |
SFD58169.1 | SFD92453.1 | SAMN02745121_00720 | SAMN02745121_02228 | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | Phosphoglucomutase. | 0.490 |
SFD58169.1 | deoC | SAMN02745121_00720 | SAMN02745121_01665 | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily. | 0.901 |
SFD58169.1 | rbsK | SAMN02745121_00720 | SAMN02745121_01928 | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.406 |
SFD80015.1 | SFD58169.1 | SAMN02745121_01666 | SAMN02745121_00720 | Uridine phosphorylase. | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | 0.934 |
SFD80015.1 | SFD92453.1 | SAMN02745121_01666 | SAMN02745121_02228 | Uridine phosphorylase. | Phosphoglucomutase. | 0.742 |
SFD80015.1 | deoC | SAMN02745121_01666 | SAMN02745121_01665 | Uridine phosphorylase. | Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily. | 0.932 |
SFD80015.1 | rbsK | SAMN02745121_01666 | SAMN02745121_01928 | Uridine phosphorylase. | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.640 |
SFD92453.1 | SFD58169.1 | SAMN02745121_02228 | SAMN02745121_00720 | Phosphoglucomutase. | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | 0.490 |
SFD92453.1 | SFD80015.1 | SAMN02745121_02228 | SAMN02745121_01666 | Phosphoglucomutase. | Uridine phosphorylase. | 0.742 |
SFD92453.1 | SFE76941.1 | SAMN02745121_02228 | SAMN02745121_05461 | Phosphoglucomutase. | Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family. | 0.640 |
SFD92453.1 | SFF33778.1 | SAMN02745121_02228 | SAMN02745121_08229 | Phosphoglucomutase. | Transketolase; Belongs to the transketolase family. | 0.611 |
SFD92453.1 | deoC | SAMN02745121_02228 | SAMN02745121_01665 | Phosphoglucomutase. | Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily. | 0.853 |
SFD94271.1 | SFE42150.1 | SAMN02745121_02339 | SAMN02745121_04212 | Methanogenic corrinoid protein MtbC1. | Predicted cobalamin binding protein. | 0.611 |
SFD94271.1 | deoC | SAMN02745121_02339 | SAMN02745121_01665 | Methanogenic corrinoid protein MtbC1. | Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily. | 0.885 |
SFE42150.1 | SFD94271.1 | SAMN02745121_04212 | SAMN02745121_02339 | Predicted cobalamin binding protein. | Methanogenic corrinoid protein MtbC1. | 0.611 |
SFE42150.1 | deoC | SAMN02745121_04212 | SAMN02745121_01665 | Predicted cobalamin binding protein. | Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily. | 0.892 |
SFE76941.1 | SFD92453.1 | SAMN02745121_05461 | SAMN02745121_02228 | Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family. | Phosphoglucomutase. | 0.640 |
SFE76941.1 | SFF33778.1 | SAMN02745121_05461 | SAMN02745121_08229 | Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family. | Transketolase; Belongs to the transketolase family. | 0.927 |
SFE76941.1 | deoC | SAMN02745121_05461 | SAMN02745121_01665 | Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family. | Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily. | 0.853 |
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