STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD82659.1Conserved hypothetical protein. (567 aa)    
Predicted Functional Partners:
SFE90911.1
SPFH domain / Band 7 family protein.
  
     0.702
SFF50441.1
CRISPR/Cas system CSM-associated protein Csm3, group 7 of RAMP superfamily.
  
     0.676
SFD65484.1
Peptidase M50B-like.
  
     0.637
SFF50429.1
CRISPR-associated RAMP protein, SSO1426 family.
  
     0.611
SFD77629.1
Hypothetical protein.
  
     0.603
SFE72446.1
HlyD family secretion protein.
  
     0.601
SFF22114.1
HlyD family secretion protein.
  
     0.597
SFE20795.1
Hypothetical protein.
  
     0.588
SFE81713.1
Hypothetical protein.
  
     0.573
SFF24802.1
WD40 repeat.
  
     0.543
Your Current Organism:
Nannocystis exedens
NCBI taxonomy Id: 54
Other names: ATCC 25963, DSM 71, N. exedens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.