STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD83203.1Protein of unknown function. (257 aa)    
Predicted Functional Partners:
SFD83191.1
Protein of unknown function.
     0.994
speE
Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine.
 
     0.877
SFD83152.1
NAD(P)-binding Rossmann-like domain-containing protein.
 
     0.852
SFD65318.1
Membrane protease subunit, stomatin/prohibitin family, contains C-terminal Zn-ribbon domain.
 
  
 0.826
SFE41758.1
Transcriptional regulatory protein RtcR.
  
     0.641
SFD83218.1
Hypothetical protein.
       0.523
SFE53694.1
Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family.
  
     0.466
SFE56566.1
Hypothetical protein.
  
     0.431
SFD83177.1
Hypothetical protein.
       0.424
SFE97828.1
Hypothetical protein.
  
     0.424
Your Current Organism:
Nannocystis exedens
NCBI taxonomy Id: 54
Other names: ATCC 25963, DSM 71, N. exedens
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