Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFD65318.1 | SFD83152.1 | SAMN02745121_00940 | SAMN02745121_01705 | Membrane protease subunit, stomatin/prohibitin family, contains C-terminal Zn-ribbon domain. | NAD(P)-binding Rossmann-like domain-containing protein. | 0.628 |
SFD65318.1 | SFD83191.1 | SAMN02745121_00940 | SAMN02745121_01708 | Membrane protease subunit, stomatin/prohibitin family, contains C-terminal Zn-ribbon domain. | Protein of unknown function. | 0.798 |
SFD65318.1 | SFD83203.1 | SAMN02745121_00940 | SAMN02745121_01709 | Membrane protease subunit, stomatin/prohibitin family, contains C-terminal Zn-ribbon domain. | Protein of unknown function. | 0.826 |
SFD65318.1 | speE | SAMN02745121_00940 | SAMN02745121_01706 | Membrane protease subunit, stomatin/prohibitin family, contains C-terminal Zn-ribbon domain. | Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine. | 0.491 |
SFD83152.1 | SFD65318.1 | SAMN02745121_01705 | SAMN02745121_00940 | NAD(P)-binding Rossmann-like domain-containing protein. | Membrane protease subunit, stomatin/prohibitin family, contains C-terminal Zn-ribbon domain. | 0.628 |
SFD83152.1 | SFD83177.1 | SAMN02745121_01705 | SAMN02745121_01707 | NAD(P)-binding Rossmann-like domain-containing protein. | Hypothetical protein. | 0.512 |
SFD83152.1 | SFD83191.1 | SAMN02745121_01705 | SAMN02745121_01708 | NAD(P)-binding Rossmann-like domain-containing protein. | Protein of unknown function. | 0.850 |
SFD83152.1 | SFD83203.1 | SAMN02745121_01705 | SAMN02745121_01709 | NAD(P)-binding Rossmann-like domain-containing protein. | Protein of unknown function. | 0.852 |
SFD83152.1 | SFE41758.1 | SAMN02745121_01705 | SAMN02745121_04195 | NAD(P)-binding Rossmann-like domain-containing protein. | Transcriptional regulatory protein RtcR. | 0.532 |
SFD83152.1 | SFE53694.1 | SAMN02745121_01705 | SAMN02745121_04596 | NAD(P)-binding Rossmann-like domain-containing protein. | Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family. | 0.548 |
SFD83152.1 | SFE56566.1 | SAMN02745121_01705 | SAMN02745121_04728 | NAD(P)-binding Rossmann-like domain-containing protein. | Hypothetical protein. | 0.434 |
SFD83152.1 | SFE97828.1 | SAMN02745121_01705 | SAMN02745121_06335 | NAD(P)-binding Rossmann-like domain-containing protein. | Hypothetical protein. | 0.439 |
SFD83152.1 | speE | SAMN02745121_01705 | SAMN02745121_01706 | NAD(P)-binding Rossmann-like domain-containing protein. | Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine. | 0.915 |
SFD83177.1 | SFD83152.1 | SAMN02745121_01707 | SAMN02745121_01705 | Hypothetical protein. | NAD(P)-binding Rossmann-like domain-containing protein. | 0.512 |
SFD83177.1 | SFD83191.1 | SAMN02745121_01707 | SAMN02745121_01708 | Hypothetical protein. | Protein of unknown function. | 0.424 |
SFD83177.1 | SFD83203.1 | SAMN02745121_01707 | SAMN02745121_01709 | Hypothetical protein. | Protein of unknown function. | 0.424 |
SFD83177.1 | speE | SAMN02745121_01707 | SAMN02745121_01706 | Hypothetical protein. | Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine. | 0.773 |
SFD83191.1 | SFD65318.1 | SAMN02745121_01708 | SAMN02745121_00940 | Protein of unknown function. | Membrane protease subunit, stomatin/prohibitin family, contains C-terminal Zn-ribbon domain. | 0.798 |
SFD83191.1 | SFD83152.1 | SAMN02745121_01708 | SAMN02745121_01705 | Protein of unknown function. | NAD(P)-binding Rossmann-like domain-containing protein. | 0.850 |
SFD83191.1 | SFD83177.1 | SAMN02745121_01708 | SAMN02745121_01707 | Protein of unknown function. | Hypothetical protein. | 0.424 |
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