Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFD85568.1 | SFD86164.1 | SAMN02745121_01890 | SAMN02745121_01940 | Amidase; Belongs to the amidase family. | Amidase; Belongs to the amidase family. | 0.771 |
SFD85568.1 | asnS | SAMN02745121_01890 | SAMN02745121_02483 | Amidase; Belongs to the amidase family. | asparaginyl-tRNA synthetase. | 0.799 |
SFD85568.1 | aspS | SAMN02745121_01890 | SAMN02745121_00192 | Amidase; Belongs to the amidase family. | aspartyl-tRNA synthetase; Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp- AMP and then transferred to the acceptor end of tRNA(Asp). Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. | 0.765 |
SFD85568.1 | gatB | SAMN02745121_01890 | SAMN02745121_01941 | Amidase; Belongs to the amidase family. | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily. | 0.991 |
SFD85568.1 | glnS | SAMN02745121_01890 | SAMN02745121_01634 | Amidase; Belongs to the amidase family. | glutaminyl-tRNA synthetase. | 0.645 |
SFD85568.1 | gltX | SAMN02745121_01890 | SAMN02745121_00345 | Amidase; Belongs to the amidase family. | glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily. | 0.796 |
SFD85568.1 | guaA | SAMN02745121_01890 | SAMN02745121_00654 | Amidase; Belongs to the amidase family. | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | 0.830 |
SFD86154.1 | SFD86164.1 | SAMN02745121_01939 | SAMN02745121_01940 | Hypothetical protein. | Amidase; Belongs to the amidase family. | 0.773 |
SFD86154.1 | gatB | SAMN02745121_01939 | SAMN02745121_01941 | Hypothetical protein. | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily. | 0.773 |
SFD86154.1 | mtnA | SAMN02745121_01939 | SAMN02745121_01942 | Hypothetical protein. | Methylthioribose-1-phosphate isomerase; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P). | 0.773 |
SFD86164.1 | SFD85568.1 | SAMN02745121_01940 | SAMN02745121_01890 | Amidase; Belongs to the amidase family. | Amidase; Belongs to the amidase family. | 0.771 |
SFD86164.1 | SFD86154.1 | SAMN02745121_01940 | SAMN02745121_01939 | Amidase; Belongs to the amidase family. | Hypothetical protein. | 0.773 |
SFD86164.1 | SFE40848.1 | SAMN02745121_01940 | SAMN02745121_04153 | Amidase; Belongs to the amidase family. | Amidase; Belongs to the amidase family. | 0.768 |
SFD86164.1 | asnS | SAMN02745121_01940 | SAMN02745121_02483 | Amidase; Belongs to the amidase family. | asparaginyl-tRNA synthetase. | 0.907 |
SFD86164.1 | aspS | SAMN02745121_01940 | SAMN02745121_00192 | Amidase; Belongs to the amidase family. | aspartyl-tRNA synthetase; Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp- AMP and then transferred to the acceptor end of tRNA(Asp). Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. | 0.860 |
SFD86164.1 | gatB | SAMN02745121_01940 | SAMN02745121_01941 | Amidase; Belongs to the amidase family. | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily. | 0.999 |
SFD86164.1 | glnS | SAMN02745121_01940 | SAMN02745121_01634 | Amidase; Belongs to the amidase family. | glutaminyl-tRNA synthetase. | 0.882 |
SFD86164.1 | gltX | SAMN02745121_01940 | SAMN02745121_00345 | Amidase; Belongs to the amidase family. | glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily. | 0.866 |
SFD86164.1 | guaA | SAMN02745121_01940 | SAMN02745121_00654 | Amidase; Belongs to the amidase family. | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | 0.830 |
SFD86164.1 | mtnA | SAMN02745121_01940 | SAMN02745121_01942 | Amidase; Belongs to the amidase family. | Methylthioribose-1-phosphate isomerase; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P). | 0.786 |
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