Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFD74613.1 | SFD86238.1 | SAMN02745121_01322 | SAMN02745121_01946 | Hypothetical protein. | Calcineurin-like phosphoesterase. | 0.566 |
SFD74613.1 | SFD86268.1 | SAMN02745121_01322 | SAMN02745121_01948 | Hypothetical protein. | HSP20 family protein; Belongs to the small heat shock protein (HSP20) family. | 0.468 |
SFD74613.1 | SFD86277.1 | SAMN02745121_01322 | SAMN02745121_01949 | Hypothetical protein. | Molecular chaperone IbpA, HSP20 family; Belongs to the small heat shock protein (HSP20) family. | 0.468 |
SFD74613.1 | SFE48846.1 | SAMN02745121_01322 | SAMN02745121_04450 | Hypothetical protein. | ATP-dependent Clp protease ATP-binding subunit ClpA; Belongs to the ClpA/ClpB family. | 0.683 |
SFD74613.1 | SFE76744.1 | SAMN02745121_01322 | SAMN02745121_05449 | Hypothetical protein. | Molecular chaperone HtpG. | 0.566 |
SFD74613.1 | SFE80831.1 | SAMN02745121_01322 | SAMN02745121_05571 | Hypothetical protein. | Type VI secretion system protein VasG; Belongs to the ClpA/ClpB family. | 0.683 |
SFD74613.1 | SFF14636.1 | SAMN02745121_01322 | SAMN02745121_07175 | Hypothetical protein. | ATP-dependent Clp protease ATP-binding subunit ClpC. | 0.683 |
SFD74613.1 | clpB | SAMN02745121_01322 | SAMN02745121_01184 | Hypothetical protein. | ATP-dependent Clp protease ATP-binding subunit ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family. | 0.683 |
SFD74613.1 | htpG | SAMN02745121_01322 | SAMN02745121_04432 | Hypothetical protein. | Molecular chaperone HtpG; Molecular chaperone. Has ATPase activity. | 0.566 |
SFD86238.1 | SFD74613.1 | SAMN02745121_01946 | SAMN02745121_01322 | Calcineurin-like phosphoesterase. | Hypothetical protein. | 0.566 |
SFD86238.1 | SFD86268.1 | SAMN02745121_01946 | SAMN02745121_01948 | Calcineurin-like phosphoesterase. | HSP20 family protein; Belongs to the small heat shock protein (HSP20) family. | 0.536 |
SFD86238.1 | SFD86277.1 | SAMN02745121_01946 | SAMN02745121_01949 | Calcineurin-like phosphoesterase. | Molecular chaperone IbpA, HSP20 family; Belongs to the small heat shock protein (HSP20) family. | 0.523 |
SFD86238.1 | SFE48846.1 | SAMN02745121_01946 | SAMN02745121_04450 | Calcineurin-like phosphoesterase. | ATP-dependent Clp protease ATP-binding subunit ClpA; Belongs to the ClpA/ClpB family. | 0.551 |
SFD86238.1 | SFE80831.1 | SAMN02745121_01946 | SAMN02745121_05571 | Calcineurin-like phosphoesterase. | Type VI secretion system protein VasG; Belongs to the ClpA/ClpB family. | 0.551 |
SFD86238.1 | SFF14636.1 | SAMN02745121_01946 | SAMN02745121_07175 | Calcineurin-like phosphoesterase. | ATP-dependent Clp protease ATP-binding subunit ClpC. | 0.496 |
SFD86238.1 | clpB | SAMN02745121_01946 | SAMN02745121_01184 | Calcineurin-like phosphoesterase. | ATP-dependent Clp protease ATP-binding subunit ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family. | 0.551 |
SFD86238.1 | grpE | SAMN02745121_01946 | SAMN02745121_02248 | Calcineurin-like phosphoesterase. | Molecular chaperone GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP [...] | 0.695 |
SFD86268.1 | SFD74613.1 | SAMN02745121_01948 | SAMN02745121_01322 | HSP20 family protein; Belongs to the small heat shock protein (HSP20) family. | Hypothetical protein. | 0.468 |
SFD86268.1 | SFD86238.1 | SAMN02745121_01948 | SAMN02745121_01946 | HSP20 family protein; Belongs to the small heat shock protein (HSP20) family. | Calcineurin-like phosphoesterase. | 0.536 |
SFD86268.1 | SFD86277.1 | SAMN02745121_01948 | SAMN02745121_01949 | HSP20 family protein; Belongs to the small heat shock protein (HSP20) family. | Molecular chaperone IbpA, HSP20 family; Belongs to the small heat shock protein (HSP20) family. | 0.764 |
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