STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD86959.1Putative sterol carrier protein. (102 aa)    
Predicted Functional Partners:
SFD74979.1
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase.
 
  
  0.653
SFD59354.1
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase.
 
  
  0.605
SFE22515.1
Oxysterol 7-alpha-hydroxylase.
  
  
  0.562
SFD54556.1
Predicted kinase, aminoglycoside phosphotransferase (APT) family.
 
  
  0.560
SFE25730.1
Enoyl-CoA hydratase/carnithine racemase.
    
  0.545
SFD74940.1
Predicted kinase, aminoglycoside phosphotransferase (APT) family.
 
  
  0.536
SFD86921.1
citronellyl-CoA dehydrogenase.
    
  0.497
SFD86897.1
isohexenylglutaconyl-CoA hydratase.
    
  0.495
SFD86946.1
Citronellol/citronellal dehydrogenase.
       0.495
SFD86929.1
geranyl-CoA carboxylase beta subunit.
       0.482
Your Current Organism:
Nannocystis exedens
NCBI taxonomy Id: 54
Other names: ATCC 25963, DSM 71, N. exedens
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