STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD87620.1PA14 domain-containing protein; Belongs to the glycosyl hydrolase 43 family. (531 aa)    
Predicted Functional Partners:
SFF24431.1
Glycosyl hydrolases family 2, TIM barrel domain; Belongs to the glycosyl hydrolase 2 family.
 
  
 0.884
SFF41060.1
Endo-1,4-beta-xylanase, GH35 family.
 
  
 0.850
SFF45993.1
Glycosyl hydrolases family 16.
 
  
 0.771
SFF26873.1
Acetyl esterase/lipase.
 
  
  0.730
SFE62426.1
Enterochelin esterase.
 
  
 0.685
SFD73428.1
Hypothetical protein.
 
 
  0.626
SFD63975.1
Putative esterase.
 
  
 0.619
SFD76957.1
Hypothetical protein.
     
 0.611
SFF37558.1
Gluconolactonase.
  
  
 0.593
SFF24490.1
dTDP-4-dehydrorhamnose reductase.
 
  
 0.591
Your Current Organism:
Nannocystis exedens
NCBI taxonomy Id: 54
Other names: ATCC 25963, DSM 71, N. exedens
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