STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE09914.1Hypothetical protein. (413 aa)    
Predicted Functional Partners:
SFE09931.1
Hypothetical protein.
       0.773
SFF24650.1
Peptide-N-glycosidase F, N terminal.
  
     0.771
SFE55172.1
Putative metal-binding motif-containing protein.
  
     0.733
SFF00788.1
Putative metal-binding motif-containing protein.
  
     0.728
SFD78098.1
Hypothetical protein.
  
     0.727
SFE70610.1
Lanthionine synthetase C-like protein.
  
     0.698
SFE30395.1
Hypothetical protein.
  
     0.676
SFD84125.1
Glycerol-3-phosphate acyltransferase.
     
 0.645
SFF01374.1
Protein of unknown function.
  
     0.630
SFD86639.1
Hypothetical protein.
  
     0.612
Your Current Organism:
Nannocystis exedens
NCBI taxonomy Id: 54
Other names: ATCC 25963, DSM 71, N. exedens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.