STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE12883.1Glycerol 3-phosphate dehydrogenase (quinone) subunit C. (451 aa)    
Predicted Functional Partners:
SFD66856.1
Glycolate oxidase.
 
 
 0.954
SFE12905.1
Protein of unknown function.
 
     0.952
SFE12865.1
Rubrerythrin.
 
  
 0.907
SFE12720.1
FAD/FMN-containing dehydrogenase.
 
 
 0.904
SFE07641.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
  
 
 0.885
SFD74577.1
Prokaryotic molybdopterin-containing oxidoreductase family, iron-sulfur binding subunit.
  
 
 0.874
SFD83572.1
Prokaryotic molybdopterin-containing oxidoreductase family, iron-sulfur binding subunit.
  
 
 0.874
SFE43148.1
Allosteric NADP-dependent malic enzyme.
  
 
 0.871
SFE03346.1
Glycerol-3-phosphate dehydrogenase.
 
 0.853
SFE40314.1
Glycerol-3-phosphate dehydrogenase.
 
 0.852
Your Current Organism:
Nannocystis exedens
NCBI taxonomy Id: 54
Other names: ATCC 25963, DSM 71, N. exedens
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