STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE21675.1Cupin domain-containing protein. (165 aa)    
Predicted Functional Partners:
SFD82668.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
    
  0.759
SFF12789.1
4-aminobutyrate aminotransferase.
  
 0.628
SFE21687.1
Hypothetical protein.
       0.605
SFE21662.1
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
       0.590
SFD46842.1
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
   
 0.543
metG
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
    
  0.541
SFF46749.1
Transcriptional regulator, GntR family.
  
    0.512
SFE89804.1
Kynureninase.
    
  0.504
SFE21646.1
Hypothetical protein.
       0.431
SFE43148.1
Allosteric NADP-dependent malic enzyme.
    
 0.419
Your Current Organism:
Nannocystis exedens
NCBI taxonomy Id: 54
Other names: ATCC 25963, DSM 71, N. exedens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.